Repeat instability: mechanisms of dynamic mutations

CE Pearson, KN Edamura, JD Cleary - Nature Reviews Genetics, 2005 - nature.com
Disease-causing repeat instability is an important and unique form of mutation that is linked
to more than 40 neurological, neurodegenerative and neuromuscular disorders. DNA repeat …

[PDF][PDF] Role of replication and CpG methylation in fragile X syndrome CGG deletions in primate cells

KN Edamura, MR Leonard, CE Pearson - The American Journal of Human …, 2005 - cell.com
Instability of the fragile X CGG repeat involves both maternally derived expansions and
deletions in the gametes of full-mutation males. It has also been suggested that the absence of …

[HTML][HTML] Effect of CAT or AGG interruptions and CpG methylation on nucleosome assembly upon trinucleotide repeats on spinocerebellar ataxia, type 1 and fragile X …

DJ Mulvihill, KN Edamura, KA Hagerman… - Journal of Biological …, 2005 - ASBMB
Nucleosome packaging regulates many aspects of DNA metabolism and is thought to mediate
genetic instability and transcription of expanded trinucleotide repeats. Both instability and …

Preliminary evaluation of next-generation sequencing performance relative to qPCR and in vitro cell culture tests for human cytomegalovirus

SHS Ng, A Azizi, K Edamura, RJ Malott… - PDA Journal of …, 2014 - journal.pda.org
To compare the performances of conventional in vitro indicator cell culture, quantitative
polymerase chain reaction (qPCR), and next-generation sequencing (NGS) as detection …

The ATTCT repeats of spinocerebellar ataxia type 10 display strong nucleosome assembly which is enhanced by repeat interruptions

KA Hagerman, H Ruan, KN Edamura, T Matsuura… - Gene, 2009 - Elsevier
Nucleosome packaging influences many aspects of DNA metabolism such as replication,
repair and transcription, and via this link likely has further downstream effects on genome …

Detection of avian retroviruses in vaccines by amplification on DF-1 cells with immunostaining and fluorescent product-enhanced reverse transcriptase endpoint …

…, P Riou, C Armanet, KN Edamura… - Journal of Clinical …, 2013 - Am Soc Microbiol
In order to ensure the safety of vaccines produced on avian cells, rigorous testing for the
absence of avian retroviruses must be performed. Current methods used to detect avian …

Evaluating the level of expressed HIV type 1 gp120 and gag proteins in the vCP1521 vector by two immunoplaque methods

A Azizi, KN Edamura, G Leung… - AIDS Research and …, 2013 - liebertpub.com
Over the past few years, several recombinant ALVAC constructs have been used as delivery
systems in various vaccine research studies and trials. The ALVAC-HIV vCP1521 vector …

Determinants of R-loop formation at convergent bidirectionally transcribed trinucleotide repeats

…, M Barber, M Tomlinson, K Nichol Edamura… - Nucleic acids …, 2011 - academic.oup.com
R-loops have been described at immunoglobulin class switch sequences, prokaryotic and
mitochondrial replication origins, and disease-associated (CAG)n and (GAA)n trinucleotide …

Interconverting conformations of slipped-DNA junctions formed by trinucleotide repeats affect repair outcome

MM Slean, K Reddy, B Wu, K Nichol Edamura… - Biochemistry, 2013 - ACS Publications
Expansions of (CTG)·(CAG) repeated DNAs are the mutagenic cause of 14 neurological
diseases, likely arising through the formation and processing of slipped-strand DNAs. These …

[BOOK][B] Identification of human proteins that bind slipped strand (CTG).(CAG) structures in vitro

M Kekis - 2005 - tspace.library.utoronto.ca
… Cleary, for adding levity to my graduate experience and for providing me with a superior
example of professionalism and scientific integrity; Kerrie Nichol Edamura, for critical …