Identification of Burkholderia cepacia Complex by PCR: A Simple Way

References

1. 1.↵
   1. Devanga Ragupathi N. K.,
   2. Veeraraghavan B.

   Accurate Identification and Epidemiological Characterization of Burkholderia cepacia Complex: An Update. Ann. Clin. Microbiol. Antimicrob. 2019, 18 (1), 7

   OpenUrlCrossRef
2. 2.↵
   1. Palleroni N. J.,
   2. Kunisawa R.,
   3. Contopoulou R.,
   4. Doudoroff M.

   Nucleic Acid Homologies in the Genus Pseudomonas. Int. J. Syst. Bacteriol. 1973, 23 (4), 333–339.

   OpenUrlCrossRef
3. 3.↵
   1. Tavares M.,
   2. Kozak M.,
   3. Balola A.,
   4. Sá-Correia I.

   Burkholderia cepacia Complex Bacteria: A Feared Contamination Risk in Water-Based Pharmaceutical Products. Clin. Microbiol. Rev. 2020, 33 (3), e00139-19

   OpenUrlAbstract/FREE Full Text
4. 4.↵
   1. Eberl L.,
   2. Vandamme P.

   Members of the Genus Burkholderia: Good and Bad Guys. F1000Res. 2016, 5, 1007, F1000 Faculty Rev-1007.

   OpenUrl
5. 5.↵
   1. Sfeir M. M.

   Burkholderia cepacia Complex Infections: More Complex than the Bacterium Name Suggest. J. Infect. 2018, 77 (3), 166–170.

   OpenUrlCrossRef
6. 6.↵
   1. Ali M.

   Burkholderia Cepacia in Pharmaceutical Industries. Int. J. Vaccines Vaccination 2016, 3 (2), 000064

   OpenUrl
7. 7.↵
   1. Sandle T.,
   2. Vijayakumar R.

   Cleanroom Microbiology, PDA/DHI Publishing: River Groove, IL, 2014; pp 141–188.
8. 8.↵
   1. Cundell T.

   Excluding Burkholderia cepacia Complex from Aqueous, Non-Sterile Drug Products. Am. Pharm. Rev. 2019, 22 (1), 36–41.

   OpenUrl
9. 9.↵
   Parenteral Drug Association Inc. Technical Report No. 67: Exclusion of Objectionable Microorganisms from Nonsterile Pharmaceuticals, Medical Devices, and Cosmetics; Bethesda, MD, 2014. https://store.pda.org/TableOfContents/TR67_TOC.pdf.
10. 10.↵
    1. Henry D.,
    2. Campbell M.,
    3. McGimpsey C.,
    4. Clarke A.,
    5. Louden L.,
    6. Burns J. L.,
    7. Roe M. H.,
    8. Vandamme P.,
    9. Speert D.

    Comparison of Isolation Media for Recovery of Burkholderia cepacia Complex from Respiratory Secretions of Patients with Cystic Fibrosis. J. Clin. Microbiol. 1999, 37 (4), 1004–1007.

    OpenUrlAbstract/FREE Full Text
11. 11.↵
    1. Coenye T.,
    2. Vandamme P.,
    3. Govan J. R. W.,
    4. LiPuma J. J.

    Taxonomy and Identification of the Burkholderia cepacia Complex. J. Clin. Microbiol. 2001, 39 (10), 3427–3436.

    OpenUrlFREE Full Text
12. 12.↵
    1. Vandamme P.,
    2. Dawyndt P.

    Classification and Identification of the Burkholderia cepacia Complex: Past, Present and Future. Syst. Appl. Microbiol. 2011, 34 (2), 87–95.

    OpenUrlCrossRefPubMed
13. 13.↵
    1. Vandamme P.,
    2. Holmes B.,
    3. Vancanneyt M.,
    4. Coenye T.,
    5. Hoste B.,
    6. Coopman R.,
    7. Revets H.,
    8. Lauwers S.,
    9. Gillis M.,
    10. Kersters K.,
    11. Govan J. R. W.

    Occurrence of Multiple Genomovars of Burkholderia cepacia in Cystic Fibrosis Patients and Proposal of Burkholderia multivorans sp. nov. Int. J. Syst. Bacteriol. 1997, 47 (4), 1188–1200.

    OpenUrlCrossRefPubMed
14. 14.↵
    1. Olive D. M.,
    2. Bean P.

    Principles and Applications of Methods for DNA-Based Typing of Microbial Organisms. J. Clin. Microbiol. 1999, 37 (6), 1661–1669.

    OpenUrlFREE Full Text
15. 15.↵
    1. Baldwin A.,
    2. Mahenthiralingam E.,
    3. Thickett K. M.,
    4. Honeybourne D.,
    5. Maiden M. C. J.,
    6. Govan J. R.,
    7. Speert D. P.,
    8. LiPuma J. J.,
    9. Vandamme P.,
    10. Dowson C. G.

    Multilocus Sequence Typing Scheme That Provides Both Species and Strain Differentiation for the Burkholderia cepacia Complex. J. Clin. Microbiol. 2005, 43 (9), 4665–4673.

    OpenUrlAbstract/FREE Full Text
16. 16.↵
    1. Jin Y.,
    2. Zhou J.,
    3. Zhou J.,
    4. Hu M.,
    5. Zhang Q.,
    6. Kong N.,
    7. Ren H.,
    8. Liang L.,
    9. Yue J.

    Genome-Based Classification of Burkholderia cepacia Complex Provides New Insight into Its Taxonomic Status. Biol. Direct 2020, 15 (1), 6

    OpenUrl
17. 17.↵
    1. Janda J. M.,
    2. Abbott S. L.

    16S rRNA Gene Sequencing for Bacterial Identification in the Diagnostic Laboratory: Pluses, Perils, and Pitfalls. J. Clin. Microbiol. 2007, 45 (9), 2761–2764.

    OpenUrlFREE Full Text
18. 18.↵
    1. Cesarini S.,
    2. Bevivino A.,
    3. Tabacchioni S.,
    4. Chiarini L.,
    5. Dalmastri C.

    RecA Gene Sequence and Multilocus Sequence Typing for Species-Level Resolution of Burkholderia cepacia Complex Isolates. Lett. Appl. Microbiol. 2009, 49 (5), 580–588.

    OpenUrlCrossRefPubMed
19. 19.↵
    1. Little J. W.,
    2. Mount D. W.

    The SOS Regulatory System of Escherichia coli. Cell 1982, 29 (1), 11–22.

    OpenUrlCrossRefPubMedWeb of Science
20. 20.↵
    1. Payne G. W.,
    2. Vandamme P.,
    3. Morgan S. H.,
    4. LiPuma J. J.,
    5. Coenye T.,
    6. Weightman A. J.,
    7. Jones T. H.,
    8. Mahenthiralingam E.

    Development of a recA Gene-Based Identification Approach for the Entire Burkholderia Genus. Appl. Environ. Microbiol. 2005, 71 (7), 3917–3927.

    OpenUrlAbstract/FREE Full Text
21. 21.↵
    1. Mahenthiralingam E.,
    2. Bischof J.,
    3. Byrne S. K.,
    4. Radomski C.,
    5. Davies J. E.,
    6. Av-Gay Y.,
    7. Vandamme P.

    DNA-Based Diagnostic Approaches for Identification of Burkholderia cepacia Complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burkholderia stabilis, and Burkholderia cepacia Genomovars I and III. J. Clin. Microbiol. 2000, 38 (9), 3165–3173.

    OpenUrlAbstract/FREE Full Text
22. 22.↵
    1. Karlin S.,
    2. Weinstock G. M.,
    3. Brendel V.

    Bacterial Classifications Derived from recA Protein Sequence Comparisons. J. Bacteriol. 1995, 177 (23), 6881–6893.

    OpenUrlAbstract/FREE Full Text
23. 23.↵
    1. Jimenez L.,
    2. Jashari T.,
    3. Vasquez J.,
    4. Zapata S.,
    5. Bochis J.,
    6. Kulko M.,
    7. Ellman V.,
    8. Gardner M.,
    9. Choe T.

    Real-Time PCR Detection of Burkholderia cepacia in Pharmaceutical Products Contaminated with Low Levels of Bacterial Contamination. PDA J. Pharm. Sci. Technol. 2018, 72 (1), 73–80.

    OpenUrlAbstract/FREE Full Text
24. 24.↵
    1. Attia M. A.,
    2. Ali A. E.,
    3. Essam T. M.,
    4. Amin M. A.

    Direct Detection of Burkholderia cepacia in Susceptible Pharmaceutical Products Using Semi-Nested PCR. PDA J. Pharm. Sci. Technol. 2016, 70 (2), 99–108.

    OpenUrlAbstract/FREE Full Text
25. 25.↵
    1. Baker G. C.,
    2. Smith J. J.,
    3. Cowan D. A.

    Review and Re-Analysis of Domain-Specific 16S Primers. J. Microbiol. Methods 2003, 55 (3), 541–555.

    OpenUrlCrossRefPubMedWeb of Science
26. 26.↵
    1. Miller R. R.,
    2. Hird T. J.,
    3. Tang P.,
    4. Zlosnik J. E. A.

    Whole-Genome Sequencing of Three Clonal Clinical Isolates of B. cenocepacia from a Patient with Cystic Fibrosis. PLoS One 2015, 10 (11), e0143472.

    OpenUrlCrossRefPubMed
27. 27.↵
    1. Rosenberg E.,
    2. DeLong E.F.,
    3. Lory S.,
    4. Stackebrandt E.,
    5. Thompson F.

    1. Coenye T.

    The Family Burkholderiaceae. In The Prokaryotes; Rosenberg E., DeLong E.F., Lory S., Stackebrandt E., Thompson F., Eds.; Springer, Berlin, Heidelberg, 2013; pp 759–776.