Identification of Burkholderia cepacia Complex by PCR: A Simple Way

References

1. 1.↵
   1. Devanga Ragupathi N. K.,
   2. Veeraraghavan B.

   Accurate Identification and Epidemiological Characterization of Burkholderia cepacia Complex: An Update. Ann. Clin. Microbiol. Antimicrob. 2019, 18 (1), 7

   OpenUrlCrossRefGoogle Scholar
2. 2.↵
   1. Palleroni N. J.,
   2. Kunisawa R.,
   3. Contopoulou R.,
   4. Doudoroff M.

   Nucleic Acid Homologies in the Genus Pseudomonas. Int. J. Syst. Bacteriol. 1973, 23 (4), 333–339.

   OpenUrlCrossRefGoogle Scholar
3. 3.↵
   1. Tavares M.,
   2. Kozak M.,
   3. Balola A.,
   4. Sá-Correia I.

   Burkholderia cepacia Complex Bacteria: A Feared Contamination Risk in Water-Based Pharmaceutical Products. Clin. Microbiol. Rev. 2020, 33 (3), e00139-19

   OpenUrlAbstract/FREE Full TextGoogle Scholar
4. 4.↵
   1. Eberl L.,
   2. Vandamme P.

   Members of the Genus Burkholderia: Good and Bad Guys. F1000Res. 2016, 5, 1007, F1000 Faculty Rev-1007.

   OpenUrlGoogle Scholar
5. 5.↵
   1. Sfeir M. M.

   Burkholderia cepacia Complex Infections: More Complex than the Bacterium Name Suggest. J. Infect. 2018, 77 (3), 166–170.

   OpenUrlCrossRefGoogle Scholar
6. 6.↵
   1. Ali M.

   Burkholderia Cepacia in Pharmaceutical Industries. Int. J. Vaccines Vaccination 2016, 3 (2), 000064

   OpenUrlGoogle Scholar
7. 7.↵
   1. Sandle T.,
   2. Vijayakumar R.

   Cleanroom Microbiology, PDA/DHI Publishing: River Groove, IL, 2014; pp 141–188.

   Google Scholar
8. 8.↵
   1. Cundell T.

   Excluding Burkholderia cepacia Complex from Aqueous, Non-Sterile Drug Products. Am. Pharm. Rev. 2019, 22 (1), 36–41.

   OpenUrlGoogle Scholar
9. 9.↵
   Parenteral Drug Association Inc. Technical Report No. 67: Exclusion of Objectionable Microorganisms from Nonsterile Pharmaceuticals, Medical Devices, and Cosmetics; Bethesda, MD, 2014. https://store.pda.org/TableOfContents/TR67_TOC.pdf.

   Google Scholar
10. 10.↵
    1. Henry D.,
    2. Campbell M.,
    3. McGimpsey C.,
    4. Clarke A.,
    5. Louden L.,
    6. Burns J. L.,
    7. Roe M. H.,
    8. Vandamme P.,
    9. Speert D.

    Comparison of Isolation Media for Recovery of Burkholderia cepacia Complex from Respiratory Secretions of Patients with Cystic Fibrosis. J. Clin. Microbiol. 1999, 37 (4), 1004–1007.

    OpenUrlAbstract/FREE Full TextGoogle Scholar
11. 11.↵
    1. Coenye T.,
    2. Vandamme P.,
    3. Govan J. R. W.,
    4. LiPuma J. J.

    Taxonomy and Identification of the Burkholderia cepacia Complex. J. Clin. Microbiol. 2001, 39 (10), 3427–3436.

    OpenUrlFREE Full TextGoogle Scholar
12. 12.↵
    1. Vandamme P.,
    2. Dawyndt P.

    Classification and Identification of the Burkholderia cepacia Complex: Past, Present and Future. Syst. Appl. Microbiol. 2011, 34 (2), 87–95.

    OpenUrlCrossRefPubMedGoogle Scholar
13. 13.↵
    1. Vandamme P.,
    2. Holmes B.,
    3. Vancanneyt M.,
    4. Coenye T.,
    5. Hoste B.,
    6. Coopman R.,
    7. Revets H.,
    8. Lauwers S.,
    9. Gillis M.,
    10. Kersters K.,
    11. Govan J. R. W.

    Occurrence of Multiple Genomovars of Burkholderia cepacia in Cystic Fibrosis Patients and Proposal of Burkholderia multivorans sp. nov. Int. J. Syst. Bacteriol. 1997, 47 (4), 1188–1200.

    OpenUrlCrossRefPubMedGoogle Scholar
14. 14.↵
    1. Olive D. M.,
    2. Bean P.

    Principles and Applications of Methods for DNA-Based Typing of Microbial Organisms. J. Clin. Microbiol. 1999, 37 (6), 1661–1669.

    OpenUrlFREE Full TextGoogle Scholar
15. 15.↵
    1. Baldwin A.,
    2. Mahenthiralingam E.,
    3. Thickett K. M.,
    4. Honeybourne D.,
    5. Maiden M. C. J.,
    6. Govan J. R.,
    7. Speert D. P.,
    8. LiPuma J. J.,
    9. Vandamme P.,
    10. Dowson C. G.

    Multilocus Sequence Typing Scheme That Provides Both Species and Strain Differentiation for the Burkholderia cepacia Complex. J. Clin. Microbiol. 2005, 43 (9), 4665–4673.

    OpenUrlAbstract/FREE Full TextGoogle Scholar
16. 16.↵
    1. Jin Y.,
    2. Zhou J.,
    3. Zhou J.,
    4. Hu M.,
    5. Zhang Q.,
    6. Kong N.,
    7. Ren H.,
    8. Liang L.,
    9. Yue J.

    Genome-Based Classification of Burkholderia cepacia Complex Provides New Insight into Its Taxonomic Status. Biol. Direct 2020, 15 (1), 6

    OpenUrlGoogle Scholar
17. 17.↵
    1. Janda J. M.,
    2. Abbott S. L.

    16S rRNA Gene Sequencing for Bacterial Identification in the Diagnostic Laboratory: Pluses, Perils, and Pitfalls. J. Clin. Microbiol. 2007, 45 (9), 2761–2764.

    OpenUrlFREE Full TextGoogle Scholar
18. 18.↵
    1. Cesarini S.,
    2. Bevivino A.,
    3. Tabacchioni S.,
    4. Chiarini L.,
    5. Dalmastri C.

    RecA Gene Sequence and Multilocus Sequence Typing for Species-Level Resolution of Burkholderia cepacia Complex Isolates. Lett. Appl. Microbiol. 2009, 49 (5), 580–588.

    OpenUrlCrossRefPubMedGoogle Scholar
19. 19.↵
    1. Little J. W.,
    2. Mount D. W.

    The SOS Regulatory System of Escherichia coli. Cell 1982, 29 (1), 11–22.

    OpenUrlCrossRefPubMedWeb of ScienceGoogle Scholar
20. 20.↵
    1. Payne G. W.,
    2. Vandamme P.,
    3. Morgan S. H.,
    4. LiPuma J. J.,
    5. Coenye T.,
    6. Weightman A. J.,
    7. Jones T. H.,
    8. Mahenthiralingam E.

    Development of a recA Gene-Based Identification Approach for the Entire Burkholderia Genus. Appl. Environ. Microbiol. 2005, 71 (7), 3917–3927.

    OpenUrlAbstract/FREE Full TextGoogle Scholar
21. 21.↵
    1. Mahenthiralingam E.,
    2. Bischof J.,
    3. Byrne S. K.,
    4. Radomski C.,
    5. Davies J. E.,
    6. Av-Gay Y.,
    7. Vandamme P.

    DNA-Based Diagnostic Approaches for Identification of Burkholderia cepacia Complex, Burkholderia vietnamiensis, Burkholderia multivorans, Burkholderia stabilis, and Burkholderia cepacia Genomovars I and III. J. Clin. Microbiol. 2000, 38 (9), 3165–3173.

    OpenUrlAbstract/FREE Full TextGoogle Scholar
22. 22.↵
    1. Karlin S.,
    2. Weinstock G. M.,
    3. Brendel V.

    Bacterial Classifications Derived from recA Protein Sequence Comparisons. J. Bacteriol. 1995, 177 (23), 6881–6893.

    OpenUrlAbstract/FREE Full TextGoogle Scholar
23. 23.↵
    1. Jimenez L.,
    2. Jashari T.,
    3. Vasquez J.,
    4. Zapata S.,
    5. Bochis J.,
    6. Kulko M.,
    7. Ellman V.,
    8. Gardner M.,
    9. Choe T.

    Real-Time PCR Detection of Burkholderia cepacia in Pharmaceutical Products Contaminated with Low Levels of Bacterial Contamination. PDA J. Pharm. Sci. Technol. 2018, 72 (1), 73–80.

    OpenUrlAbstract/FREE Full TextGoogle Scholar
24. 24.↵
    1. Attia M. A.,
    2. Ali A. E.,
    3. Essam T. M.,
    4. Amin M. A.

    Direct Detection of Burkholderia cepacia in Susceptible Pharmaceutical Products Using Semi-Nested PCR. PDA J. Pharm. Sci. Technol. 2016, 70 (2), 99–108.

    OpenUrlAbstract/FREE Full TextGoogle Scholar
25. 25.↵
    1. Baker G. C.,
    2. Smith J. J.,
    3. Cowan D. A.

    Review and Re-Analysis of Domain-Specific 16S Primers. J. Microbiol. Methods 2003, 55 (3), 541–555.

    OpenUrlCrossRefPubMedWeb of ScienceGoogle Scholar
26. 26.↵
    1. Miller R. R.,
    2. Hird T. J.,
    3. Tang P.,
    4. Zlosnik J. E. A.

    Whole-Genome Sequencing of Three Clonal Clinical Isolates of B. cenocepacia from a Patient with Cystic Fibrosis. PLoS One 2015, 10 (11), e0143472.

    OpenUrlCrossRefPubMedGoogle Scholar
27. 27.↵
    1. Rosenberg E.,
    2. DeLong E.F.,
    3. Lory S.,
    4. Stackebrandt E.,
    5. Thompson F.

    1. Coenye T.

    The Family Burkholderiaceae. In The Prokaryotes; Rosenberg E., DeLong E.F., Lory S., Stackebrandt E., Thompson F., Eds.; Springer, Berlin, Heidelberg, 2013; pp 759–776.

    Google Scholar